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Facts about Wildlife Diseases: Gastrointestinal Parasites of Farmed White-tailed Deer in Florida

Sydney L. Cottingham, Heather D.S. Walden, Samantha M. Wisely, and Juan M. Campos-Krauer

This article is brought to you by the faculty and students of University of Florida’s Institute of Food and Agricultural Science, Cervidae Health Research Initiative. Please visit the CHeRI website at for more information about farmed deer health and management.


White-tailed deer are susceptible to infection by gastrointestinal parasites of numerous taxonomic groups, including helminths (roundworms, tapeworms, and flukes) and protozoans (coccidia and flagellates). Although not all parasite infections cause clinical disease, some gastrointestinal parasite species can affect the health and productivity of infected hoofstock, causing economic loss and necessitating management action. An understanding of parasite life cycles, host susceptibility, and environmental factors affecting parasite transmission is critical to developing effective parasite management strategies.

This publication will serve as a guide to common parasites of farmed white-tailed deer in Florida and will provide farmed deer producers with recommendations for diagnosis and management of gastrointestinal parasites.

Impacts of Parasitism on Deer Production

Little information is available to quantify production loss in North American white-tailed deer operations, but gastrointestinal parasitism presents a significant challenge to captive cervid industries in Europe and New Zealand (Haigh et al. 2002; Castillo-Alcala et al. 2007), and to small ruminant production systems globally (Stromberg and Gasbarre 2006; Verocai et al. 2020). Additionally, disease and death associated with gastrointestinal parasite infection have been reported in free-ranging white-tailed deer (Forrester et al. 1974a and 1974b; Davidson et al. 1980; Prestwood and Pursglove 1981).

Gastrointestinal parasites can cause both clinical and subclinical disease in infected livestock. Infection with parasitic gastrointestinal roundworms reduces production by suppressing host appetite, impairing gastrointestinal function, and altering protein metabolism (Fox 1997). Even in the absence of clinical disease, the effects of chronic parasitism can be dramatic; for example, in pair-feeding studies, the appetite of sheep with chronic, subclinical gastrointestinal parasite infections was 15% to 20% lower than in animals without parasite burdens (Coop et al. 1982; Sykes et al. 1988). Production of trophy bucks for hunting preserves is a primary goal of many deer farming operations, and antler development in male white-tailed deer is affected considerably by nutrition (French et al. 1956; Magruder et al. 1957; Brown 1990; Demarais and Strickland 2011). Thus, depressed appetite and reduction in voluntary feed intake due to gastrointestinal parasitism could prevent bucks from achieving their genetic potential for antler growth. Additionally, there is some suggestion that parasites may be associated with the development of antler asymmetry in reindeer (Folstad et al. 1996), though the effect of parasites on antler symmetry in white-tailed deer has not been evaluated.

Common Parasites of Florida White-tailed Deer

Farmed white-tailed deer are affected by many of the same parasite taxa that infect traditional ruminant livestock (sheep, goats, and cattle) (Foreyt 1981; Kingston 1981). Common gastrointestinal parasites of white-tailed deer can be divided into four major groups: roundworms (nematodes), tapeworms (cestodes), flukes (trematodes), and coccidia (protozoans).


Gastrointestinal roundworms are the most frequently encountered and economically significant parasites of livestock (Stromberg and Gasbarre 2006). White-tailed deer are parasitized by a diversity of roundworms, but only a few of these roundworms are known to cause disease. Of the 32 species of gastrointestinal roundworms that have been found in white-tailed deer (Prestwood and Pursglove 1981), 21 of these species have been reported in Florida (Forrester 1992). Though infection with gastrointestinal roundworms is nearly ubiquitous among ruminants including white-tailed deer, infection intensity among free-ranging white-tailed deer is generally low, and resulting disease is rare or mild (Prestwood and Pursglove 1981). However, two roundworm species, the barberpole worm (Haemonchus contortus) and Strongyloides papillosus,are known to cause disease in both farmed and free-ranging white-tailed deer.

Haemonchus contortus has a direct life cycle with free-living intermediate stages and parasitic adult stages. Adult worms produce eggs that are excreted with host feces. Eggs develop in the environment and hatch into first-stage larvae (L1). These larvae feed on bacteria in feces and develop into second-stage larvae (L2). Second-stage larvae develop into highly motile third-stage larvae (L3) measuring 0.65–0.74 mm in length (Zajac and Conboy 2012). These L3 larvae are the infective life stage of H. contortus. L3 larvae migrate vertically from feces to herbaceous vegetation and are ingested by browsing deer. L3 larvae are predominantly found at the base of vegetation, but may migrate to the top of blades of grass when wet environmental conditions promote L3 motility (Silva et al. 2008; Santos et al. 2012). About 48 hours after ingestion, the L3 larvae molt and become fourth-stage larvae (L4). L4 larvae take blood meals from the abomasum (true stomach) and mature into hematophagous (blood-feeding) adult worms measuring 11–27 mm (Prestwood and Pursglove 1981; Lichtenfels et al. 1994).

Survival of free-living larvae on pastures is determined by environmental factors, most importantly temperature and moisture (Waller 2006; Besier et al. 2016). In warm temperate regions such as Florida, spring and early summer conditions are especially permissive to rapid H. contortus hatch rates and survival of free-living larvae on pasture (Besier et al. 2016). In moist environments, H. contortus hatch rates increase with temperature, reaching the optimal temperature range for egg development and larval survival between 68˚F –86˚F (Besier et al. 2016).

The life cycle of Haemonchus contortus, a pathogenic roundworm parasite of white-tailed deer.
Figure 1. The life cycle of Haemonchus contortus, a pathogenic roundworm parasite of white-tailed deer.
Credit: S. L. Cottingham, CHeRI. Created with

Adult Haemonchus contortus are aggressive blood-feeders, and each adult can consume 0.05 mL of host blood per day (Alba-Hurtado and Muñoz-Guzmán 2013). Disease caused by H. contortus infection (“haemonchosis”) is a result of moderate to severe blood loss due to feeding worms. Clinical signs of haemonchosis include mucosal pallor, weakness, emaciation, stunted growth, enlarged lymph nodes, and submandibular edema (“bottle jaw”) (Prestwood and Pursglove 1981). Deer younger than 6 months of age are most likely to be affected (Prestwood and Pursglove 1981). Haemonchus contortus have a wide geographic distribution but are found at greater prevalence and intensity in white-tailed deer in coastal plains in the southeastern United States (Davidson et al. 1980).

Strongyloides papillosus worms have a unique life history where the life cycle can be completed with or without a host, and in which only female worms are parasitic (Prestwood and Pursglove 1981). Adult female worms living within a host can produce eggs in the absence of male worms (“parthenogenesis”). Eggs are shed with the host feces and either develop directly into infective larvae or differentiate into male and female adults that undergo sexual reproduction to produce eggs that hatch into first-stage larvae (L1), then undergo two molts to become infective third-stage larvae (L3). Deer may become infected by Strongyloides papillosus by ingesting food or water contaminated with L3 larvae (Prestwood and Pursglove 1981). Additionally, L3 larvae are capable of penetrating unbroken skin and infecting new hosts. Fawns may become infected before birth via intrauterine transmission or shortly after birth by consuming L3 larvae shed in the milk of an infected doe (Forrester et al. 1974a; Prestwood and Pursglove 1981).

Infection with Strongyloides does not seem to cause disease (“strongyloidosis”) in free-ranging white-tailed deer due to its uncommon occurrence and low infection intensity in this population (Prestwood and Pursglove 1981). However, outbreaks of strongyloidosis can be a significant cause of mortality in captive white-tailed deer fawns in Florida (Forrester et al. 1974b, 1974a). Clinical signs of strongyloidosis include diarrhea, weakness, dehydration, and weight loss (Prestwood and Pursglove 1981). Death often occurs 12–36 hours after the appearance of clinical signs (Forrester et al. 1974b; Pursglove et al. 1976; Prestwood and Pursglove 1981).


Throughout their range, white-tailed deer serve as intermediate or definitive hosts for six tapeworm species. Three taxa of tapeworms, Moniezia spp., Taenia hydatigena, and Taenia omissa have been reported in white-tailed deer in Florida (Forrester 1992). White-tailed deer serve as a definitive host for Moniezia sp. and an intermediate host for T. hydatigena and T. omissa (Foreyt 1981; Forrester 1992).

White-tailed deer can become infected with Moniezia spp. following ingestion of free-living orbatid mites containing cysticercoids, the infective intermediate stage of this tapeworm (Figure 2). Moniezia cysticercoids develop into adults in the small intestines of the host. Adult Moniezia spp. shed gravid proglottids that are excreted in the feces. Once in the environment, Moniezia spp. oncospheres are ingested by the species’ intermediate host, orbatid mites found in soil. Once ingested, the oconocpheres infect the orbatid mite’s digestive system. The oncospheres develop into infective cysticercoids within the orbatid mite, and the life cycle continues when a deer ingests the infected orbatid mite (Niilo 1969; Foreyt 1981). Infections of white-tailed deer by Moniezia sp. may occur incidentally on pasture grazed by both deer and livestock when deer consume orbatid mites that have been infected by Moniezia tapeworm shed in the feces of infected domestic livestock (Foreyt 1981). White-tailed deer serve as intermediate hosts of Taenia spp. and can become infected by ingesting vegetation contaminated with Taenia eggs (Figure 2). The eggs containing hexacanth embryos hatch in the deer’s digestive tract, penetrate the wall of the digestive tract, and travel through the hepatic parenchyma before emerging from the surface of the liver into the peritoneal cavity. The hexacanth embryos then develop into cysticerci, an intermediate larval tapeworm stage, and encyst in the host’s muscle tissue. The life cycle of Taenia spp. tapeworms is completed when intermediate host tissue containing cysticerci is consumed by the definitive host, a carnivore, particularly wild and domestic canids. Taenia mature into adults in the intestines of infected carnivores and shed gravid proglottids into the feces. The life cycle of Taenia continues when a white-tailed deer ingests vegetation contaminated with carnivore feces containing Taenia eggs (Niilo 1969).

Disease caused by Haemonchus contortus infection is a result of moderate to severe blood loss.  Severe anemia is apparent in the pale conjunctiva and gums of a 5-month-old white-tailed deer with fatal haemonchosis.
Figure 2. Disease caused by Haemonchus contortus infection is a result of moderate to severe blood loss. Severe anemia is apparent in the pale conjunctiva and gums of a 5-month-old white-tailed deer with fatal haemonchosis.
Credit: S. L. Cottingham, CHeRI

Infection of white-tailed deer by Moniezia spp., T. hydatigena, and T. omissa is uncommon and infection is considered innocuous in white-tailed deer (Foreyt 1981), though migration of Taenia hexacanth embryos may cause damage to the liver and other organs (Cheatum 1951; Prestwood et al. 1976).


Infection by six different species of flukes have been recorded in white-tailed deer, but the giant liver fluke (Fascioloides magna) and the rumen fluke (Paramphistomum liorchis) are the only species known to infect white-tailed deer in Florida (Foreyt et al. 1977; Forrester 1992). Giant liver flukes and rumen flukes have similar indirect life cycles (Figure 3). The eggs of both fluke species are shed in the feces of infected deer. Once in the environment, the eggs develop and hatch in water into a free-swimming miracidium. The miracidium penetrates the tissue of an aquatic snail, developing and multiplying into many free-swimming cercariae. The cercariae attach to vegetation and form a protective cyst, becoming metacercariae, the infective stage of the giant liver fluke and rumen fluke. Metacercariae encysted on vegetation are ingested by browsing deer. The metacercariae of giant liver flukes excyst and migrate to the liver where they mature into adults (Figure 5), while the metacercariae of rumen flukes excyst and mature in the small intestine. Infection with giant liver flukes and rumen flukes is more common in moist sites due to the presence of the aquatic snail intermediate host necessary to the parasite life cycle (Pursglove et al. 1977). Giant liver fluke prevalence is higher in Florida than in the rest of the southeast United States, and three enzootic zones have been identified in the southeastern Panhandle, east-central Florida, and the southern tip of the Florida peninsula (Forrester 1992). Infections with rumen fluke are widely distributed throughout the state (Dinaburg 1939; Prestwood et al. 1970; Harlow and Jones 1965; orrester 1992; Forrester and Wright 1989).

The life cycle of Moniezia sp. and Taenia spp., the two genera of tapeworms known to infect white-tailed deer in Florida.
Figure 3. The life cycle of Moniezia sp. and Taenia spp., the two genera of tapeworms known to infect white-tailed deer in Florida.
Credit: J. M. Campos-Krauer, CHeRI


The life cycle of Fascioloides magna, a trematode parasite known to infect white-tailed deer in Florida.
Figure 4. The life cycle of Fascioloides magna, a trematode parasite known to infect white-tailed deer in Florida.
Credit: J. M. Campos-Krauer, CHeRI


Fascioloides magna, the giant liver fluke, recovered from the liver of a 10-year-old male white-tailed deer on a deer farm in St. Lucie County, Florida. Top: A large cyst (black arrow) in the liver containing a single adult fluke. Bottom: Two adult liver flukes (black arrows) excised from the liver tissue.
Figure 5. Fascioloides magna, the giant liver fluke, recovered from the liver of a 10-year-old male white-tailed deer on a deer farm in St. Lucie County, Florida. Top: A large cyst (black arrow) in the liver containing a single adult fluke. Bottom: Two adult liver flukes (black arrows) excised from the liver tissue.
Credit: J. L. Smith, CHeRI

Giant liver fluke and rumen fluke generally cause little harm to otherwise healthy deer, thoughmigration of immature giant liver fluke causes hemorrhage in the hepatic parenchyma, and juvenile stages of the rumen fluke may induce enteritis in the small intestine (Whitlock 1939).


Coccidia are single-celled protozoan parasites of the genera Isospora and Eimeria. Infections by four different species of coccidia (Eimeria odocoilei, E. virginianus, E. mccordocki, and E. madisonensis) have been recorded in white-tailed deer, and all have been found in Florida white-tailed deer (Kingston 1981; Forrester 1992). The life cycle of Eimeria is direct. Infection occurs through ingestion of sporulated Eimeria oocysts found in contaminated food, water, soil, or bedding. The wall of the oocyst is digested in the host’s gut, releasing sporozoites. Sporozoites penetrate the epithelial cells of the intestinal mucosa and undergo asexual reproduction within the host cell to produce numerous merozoites. The merozoites escape the host cell and infect surrounding cells, undergoing a second round of asexual reproduction. Second-generation merozoites continue to invade and rupture host cells, proliferating through asexual reproduction and eventually differentiating into male and female gametocytes. Gametocytes penetrate epithelial cells and undergo sexual reproduction, then rupture the host cell releasing oocysts into the intestine. The oocysts are passed with the feces and sporulate (develop sporozoites within oocysts) in the environment. These sporulated oocysts are the infective stage of the Eimeria life cycle (Kingston 1981).

Eimeria infections may be found in both sub-adult and adult deer, and infection is more common in animals confined at high densities. Clinical signs of disease caused by Eimeria infection (“coccidiosis”) include weight loss, watery yellow or greenish diarrhea, or blood and mucus in the feces (Kingston 1981). Mild infection may not produce observable signs of disease, but severe coccidiosis may be fatal (Levine 1961).

Diagnosing Infection

Infection by gastrointestinal parasites is essentially ubiquitous among grazing ruminant livestock, and it is generally assumed that stock are infected, even if fecal egg shedding is below the detectible threshold (Verocai et al. 2020). Diagnostic tests for gastrointestinal parasites are an important tool for assessing individual and herd health and for developing effective parasite management strategies. Microscopic fecal examination is the most commonly used technique to diagnose gastrointestinal parasite infection in livestock, including captive white-tailed deer (Verocai et al. 2020). Gastrointestinal parasites shed eggs, oocysts, and larvae in host feces, and these life stages can be detected and identified through microscopic examination. The eggs of some roundworms are indistinguishable by microscopic examination. To differentiate between species, a fecal sample may be cultured until eggs hatch into an identifiable larval stage. Additionally, identification and enumeration of adult worms collected during post-mortem examination may be used to identify gastrointestinal worms to species. Microscopic fecal examination, coproculture, and post-mortem parasite identification are services offered by veterinary diagnostic laboratories and many veterinary clinics. Contact diagnostic laboratories and veterinary clinics directly for sample submission requirements.

Eggs of GI parasites commonly observed in white-tailed deer fecal specimens. (A) Trichostrongyle-type egg (B) Strongyloides sp. egg (C) Eimeria sp. oocysts inside red circle (D) Moniezia sp. egg. Inside red circle.
Figure 6. Eggs of GI parasites commonly observed in white-tailed deer fecal specimens. (A) Trichostrongyle-type egg (B) Strongyloides sp. egg (C) Eimeria sp. oocysts inside red circle (D) Moniezia sp. egg. Inside red circle.
Credit: S. Cottingham, UF/IFAS

Integrative Parasite Management

The goal of parasite management is to break the transmission cycle and reduce parasite burdens below the threshold of economic loss. A combination of anthelmintic drugs (dewormers) and non-chemical management actions may be used to control GI parasites in farmed deer herds. Broad-spectrum anthelmintics are widely available and target both roundworms and flatworms (flukes and tapeworms). Modern broad-spectrum anthelmintics are grouped into five chemical categories: benzimidazoles, macrocyclic lactones, imidazothiazoles, spiroindoles, and amino-acetonitrile derivatives. Anthelmintics may be administered as an oral drench or feed top-dress, by injection, or as a topical application. Feed top-dresses are easy to administer and do not require direct handling of animals, but the exact dosage administered to each animal is difficult to determine. Oral drenches, injections, and topically administered products allow precise dosing but necessitate handling of individuals for treatment. No anthelmintics or anticoccidials are specifically authorized by the FDA for use in white-tailed deer, and off-label anthelmintic use should be approved and administered under the supervision of your herd veterinarian.

Anthelmintic resistance has been reported in parasites of all conventional livestock species and to drugs of all anthelmintic classes (Kaplan 2004). Drug resistance has not yet been reported in parasites of farmed white-tailed deer, however a survey of parasite control on Pennsylvania deer farms has raised concerns that parasite management practices promoting resistance may be common (Brooks and Jayarao 2008).

The distribution of gastrointestinal nematodes is “overdispersed” among hosts, meaning that parasites are non-randomly distributed in the host population, with most hosts carrying low parasite numbers and onlya small number of individuals carrying most of the parasites burden (Anderson and May 1978).

Rather than treating all animals in the herd, treating only disease-susceptible individuals and those animals shedding high numbers of eggs has proven effective in slowing the development of resistance (Kenyon et al. 2009). Producers should work with their veterinarians to develop criteria of physical indicators (body condition score, diarrhea, etc.) and fecal egg count values that must be met before anthelmintics are administered to an individual. This method of targeted selective deworming maintains a proportion of susceptible parasites in the “refugia” of untreated animals by removing the selection pressure of anthelmintic exposure. Evaluating the efficacy of anthelmintic treatments is critical to achieving sustainable parasite control in your deer. Fecal egg counts from a sample of your herd should be evaluated before anthelmintic treatment and again 14 days after treatment to evaluate efficacy. Consult your herd veterinarian to develop an anthelmintic treatment plan suitable for the parasite challenges facing your herd.

Non-chemical parasite management can complement anthelmintic treatment by reducing contamination of pastures by parasite eggs, thereby slowing reinfection of treated animals (Fox 2014). Slowing reinfection allows for reduced use of anthelmintic drugs, which in turn slows the development of anthelmintic resistance in parasite populations. Decreasing stocking rates and removing fecal material from pastures reduces the number of eggs, oocysts, and larvae to which deer are exposed. Additionally, mowing pastures may reduce exposure of browsing deer to infective larvae (Vegora 1960). Rotational grazing methods for parasite control rely on an understanding of regional parasite epidemiology and fall broadly into three categories: evasive, preventative, and diluting strategies (Barger 1997). Evasive strategies depend on moving the herd from a parasite egg-contaminated pasture to a “clean” pasture before the seasonal emergence of infective parasite larvae in the original pasture. Preventative strategies use anthelmintics to suppress fecal egg output until the level of infective larvae on the pasture has declined. Diluting strategies involve simultaneous grazing of deer alongside non-cervid livestock that are not susceptible to the same species of parasites. Concurrent grazing of multiple species with different parasite susceptibility can reduce the intensity of pasture contamination by deer parasites (Barger 1997).

Many forages in the natural diet of deer contain chemical compounds called tannins that may have natural anthelmintic effects (Hoste et al. 2006). However, the use of tannin-rich plants as deworming agents in white-tailed deer shows mixed results, with one study showing that tannin-supplemented diets did not affect fecal parasite loads, but were associated with decreased feed intake, reduced protein digestibility, and reduced weight gain (Chapman 2007). Another study found that the effect of dietary tannins on nutritional status and dietary intake varied by season and suggested that there may be substantial individual variation in preference for tannin-rich forages, with some individual deer selecting forages with up to 5% tannins (Chapman et al. 2010). As in other ruminant hoofstock species, the utility of tannins as feed additives in deer may be concentration dependent, with high tannin contents (>7%) causing undesirable production outcomes including decreased feed intake and decreased weight gain (Hoste et al. 2006).


Gastrointestinal parasites are a constant challenge to farmed white-tailed deer and effective, sustainable management is essential to maintaining herd health and preventing loss of production. Florida’s warm, humid climate promotes survival of parasites on pasture, and infection pressure can be high during spring and summer months. Microscopic fecal examination is a critical tool used to guide anthelmintic treatment and to evaluate and maintain the efficacy of deworming regimens. The timing of fecal egg counts and anthelmintic treatment may vary according to herd demographics, and targeted selective treatment should be used as part of a refugia-based control strategy. Non-chemical management techniques provide a valuable complement to anthelmintic deworming and may decrease the number of deworming treatments necessary in your herd. Consult your veterinarian to develop a plan to provide safe, effective, and sustainable parasite management for your deer herd.

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Peer Reviewed

Publication #WEC453

Date: 10/23/2022


Fact Sheet

About this Publication

This document is WEC453, one of a series of the Department of Wildlife Ecology and Conservation, UF/IFAS Extension. Original publication date October 2022. Visit the EDIS website at for the currently supported version of this publication.

About the Authors

Sydney L. Cottingham, graduate student, Department of Large Animal Clinical Sciences and College of Veterinary Medicine; Heather D.S. Walden, assistant professor, Department of Comparative, Diagnostic and Population Medicine, College of Veterinary Medicine; Samantha M. Wisely, professor, Department of Wildlife Ecology and Conservation; and Juan M. Campos Krauer, assistant professor Department of Large Animal Clinical Sciences, College of Veterinary Medicine and Department of Wildlife Ecology and Conservation, UF/IFAS Extension, Gainesville, Florida 32611.


  • Samantha Wisely